Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nedd8P29595 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nedd8P29595 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nedd8P29595 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Nedd8P29595 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nedd8P29595 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Nedd8P29595 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nedd8P29595 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nedd8P29595 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nedd8P29595 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nedd8P29595 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Nedd8P29595 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nedd8P29595 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.51□□□□□ -0.09
Nedd8P29595 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nedd8P29595 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nedd8P29595 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nedd8P29595 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nedd8P29595 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nedd8P29595 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nedd8P29595 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.51□□□□□ -0.09
Nedd8P29595 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nedd8P29595 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nedd8P29595 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nedd8P29595 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.51□□□□□ -0.09
Nedd8P29595 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nedd8P29595 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nedd8P29595 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Nedd8P29595 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nedd8P29595 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.5□□□□□ -0.09
Nedd8P29595 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.5□□□□□ -0.09
Nedd8P29595 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.5□□□□□ -0.09
Nedd8P29595 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.5□□□□□ -0.09
Nedd8P29595 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.5□□□□□ -0.09
Nedd8P29595 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Nedd8P29595 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.5□□□□□ -0.09
Nedd8P29595 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nedd8P29595 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.5□□□□□ -0.09
Nedd8P29595 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.49□□□□□ -0.09
Nedd8P29595 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Nedd8P29595 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.49□□□□□ -0.09
Nedd8P29595 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.49□□□□□ -0.09
Nedd8P29595 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.49□□□□□ -0.09
Nedd8P29595 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Nedd8P29595 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Gm42642-201ENSMUST00000200683 355 ntBASIC14.49□□□□□ -0.09
Nedd8P29595 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.49□□□□□ -0.09
Nedd8P29595 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Nedd8P29595 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nedd8P29595 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.49□□□□□ -0.09
Nedd8P29595 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Dio3-201ENSMUST00000097228 1449 ntBASIC14.49□□□□□ -0.09
Nedd8P29595 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nedd8P29595 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Nedd8P29595 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.48□□□□□ -0.09
Nedd8P29595 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Nedd8P29595 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms