Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col8a2P25318 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.05□□□□□ -0.32
Col8a2P25318 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col8a2P25318 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col8a2P25318 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col8a2P25318 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col8a2P25318 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Col8a2P25318 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col8a2P25318 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col8a2P25318 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col8a2P25318 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col8a2P25318 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col8a2P25318 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.04□□□□□ -0.32
Col8a2P25318 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.04□□□□□ -0.32
Col8a2P25318 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.04□□□□□ -0.32
Col8a2P25318 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.04□□□□□ -0.32
Col8a2P25318 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col8a2P25318 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.04□□□□□ -0.32
Col8a2P25318 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Col8a2P25318 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.04□□□□□ -0.32
Col8a2P25318 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col8a2P25318 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Col8a2P25318 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Gm11594-201ENSMUST00000122313 162 ntBASIC13.03□□□□□ -0.32
Col8a2P25318 Gm4899-201ENSMUST00000178708 719 ntBASIC13.03□□□□□ -0.32
Col8a2P25318 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.03□□□□□ -0.32
Col8a2P25318 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.03□□□□□ -0.32
Col8a2P25318 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.03□□□□□ -0.32
Col8a2P25318 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Dancr-204ENSMUST00000132389 2347 ntBASIC13.03□□□□□ -0.32
Col8a2P25318 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col8a2P25318 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col8a2P25318 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col8a2P25318 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col8a2P25318 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Col8a2P25318 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col8a2P25318 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col8a2P25318 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col8a2P25318 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col8a2P25318 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Gm11779-201ENSMUST00000118541 368 ntBASIC13.02□□□□□ -0.33
Col8a2P25318 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Col8a2P25318 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Col8a2P25318 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.02□□□□□ -0.33
Col8a2P25318 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.02□□□□□ -0.33
Col8a2P25318 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.02□□□□□ -0.33
Col8a2P25318 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.02□□□□□ -0.33
Col8a2P25318 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.02□□□□□ -0.33
Col8a2P25318 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Col8a2P25318 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms