Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Gm5643-201ENSMUST00000117081 966 ntBASIC17.56■□□□□ 0.4
Tpm3P21107 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm3P21107 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.56■□□□□ 0.4
Tpm3P21107 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm3P21107 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm3P21107 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Tpm3P21107 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm3P21107 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm3P21107 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Tpm3P21107 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.55■□□□□ 0.4
Tpm3P21107 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.55■□□□□ 0.4
Tpm3P21107 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.55■□□□□ 0.4
Tpm3P21107 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
Tpm3P21107 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Tpm3P21107 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Tpm3P21107 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm3P21107 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm3P21107 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Tpm3P21107 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm3P21107 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm3P21107 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm3P21107 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm3P21107 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Tpm3P21107 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.54■□□□□ 0.4
Tpm3P21107 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.54■□□□□ 0.4
Tpm3P21107 Gm44450-201ENSMUST00000199528 114 ntBASIC17.54■□□□□ 0.4
Tpm3P21107 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm3P21107 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm3P21107 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm3P21107 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Tpm3P21107 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm3P21107 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm3P21107 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Tpm3P21107 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm3P21107 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Tpm3P21107 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm3P21107 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Tpm3P21107 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm3P21107 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm3P21107 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Tpm3P21107 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.53■□□□□ 0.4
Tpm3P21107 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm3P21107 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm3P21107 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Tpm3P21107 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm3P21107 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm3P21107 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm3P21107 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm3P21107 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Tpm3P21107 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm3P21107 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm3P21107 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm3P21107 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm3P21107 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm3P21107 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm3P21107 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Tpm3P21107 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tpm3P21107 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.52■□□□□ 0.39
Tpm3P21107 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Tpm3P21107 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Tpm3P21107 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tpm3P21107 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tpm3P21107 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.51■□□□□ 0.39
Tpm3P21107 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
Tpm3P21107 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm3P21107 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.51■□□□□ 0.39
Tpm3P21107 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm3P21107 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm3P21107 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Tpm3P21107 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm3P21107 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.51■□□□□ 0.39
Tpm3P21107 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm3P21107 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.51■□□□□ 0.39
Tpm3P21107 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tpm3P21107 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm3P21107 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms