Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UbbP0CG49 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UbbP0CG49 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UbbP0CG49 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UbbP0CG49 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.62□□□□□ -0.23
UbbP0CG49 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.62□□□□□ -0.23
UbbP0CG49 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
UbbP0CG49 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UbbP0CG49 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UbbP0CG49 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UbbP0CG49 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.62□□□□□ -0.23
UbbP0CG49 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UbbP0CG49 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.62□□□□□ -0.23
UbbP0CG49 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.62□□□□□ -0.23
UbbP0CG49 Gm10052-201ENSMUST00000168019 960 ntBASIC13.62□□□□□ -0.23
UbbP0CG49 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UbbP0CG49 Mir5130-201ENSMUST00000175160 84 ntBASIC13.62□□□□□ -0.23
UbbP0CG49 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UbbP0CG49 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
UbbP0CG49 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.62□□□□□ -0.23
UbbP0CG49 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.62□□□□□ -0.23
UbbP0CG49 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UbbP0CG49 Gm7729-201ENSMUST00000050143 801 ntBASIC13.62□□□□□ -0.23
UbbP0CG49 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UbbP0CG49 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UbbP0CG49 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
UbbP0CG49 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.62□□□□□ -0.23
UbbP0CG49 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
UbbP0CG49 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UbbP0CG49 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
UbbP0CG49 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UbbP0CG49 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UbbP0CG49 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
UbbP0CG49 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UbbP0CG49 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.62□□□□□ -0.23
UbbP0CG49 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UbbP0CG49 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UbbP0CG49 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
UbbP0CG49 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UbbP0CG49 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UbbP0CG49 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
UbbP0CG49 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.61□□□□□ -0.23
UbbP0CG49 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UbbP0CG49 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UbbP0CG49 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
UbbP0CG49 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UbbP0CG49 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UbbP0CG49 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
UbbP0CG49 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.61□□□□□ -0.23
UbbP0CG49 Gm13436-201ENSMUST00000120418 567 ntBASIC13.61□□□□□ -0.23
UbbP0CG49 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.61□□□□□ -0.23
UbbP0CG49 Gm44430-201ENSMUST00000203376 995 ntBASIC13.61□□□□□ -0.23
UbbP0CG49 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.61□□□□□ -0.23
UbbP0CG49 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UbbP0CG49 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UbbP0CG49 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
UbbP0CG49 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UbbP0CG49 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UbbP0CG49 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UbbP0CG49 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UbbP0CG49 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UbbP0CG49 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
UbbP0CG49 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UbbP0CG49 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UbbP0CG49 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UbbP0CG49 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UbbP0CG49 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UbbP0CG49 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
UbbP0CG49 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.6□□□□□ -0.23
UbbP0CG49 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
UbbP0CG49 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.6□□□□□ -0.23
UbbP0CG49 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.6□□□□□ -0.23
UbbP0CG49 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.6□□□□□ -0.23
UbbP0CG49 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
UbbP0CG49 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
UbbP0CG49 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.6□□□□□ -0.23
UbbP0CG49 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UbbP0CG49 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.6□□□□□ -0.23
UbbP0CG49 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UbbP0CG49 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms