Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Gm45560-201ENSMUST00000211492 1472 ntBASIC10.81□□□□□ -0.68
Smim1P0C8K7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Smim1P0C8K7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Gm43017-201ENSMUST00000198296 752 ntBASIC10.8□□□□□ -0.68
Smim1P0C8K7 Gm7291-201ENSMUST00000199147 382 ntBASIC10.8□□□□□ -0.68
Smim1P0C8K7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Smim1P0C8K7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC10.8□□□□□ -0.68
Smim1P0C8K7 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Smim1P0C8K7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.79□□□□□ -0.68
Smim1P0C8K7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC10.79□□□□□ -0.68
Smim1P0C8K7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 AC166341.7-201ENSMUST00000221698 126 ntBASIC10.79□□□□□ -0.68
Smim1P0C8K7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.79□□□□□ -0.68
Smim1P0C8K7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smim1P0C8K7 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Gm32996-201ENSMUST00000199828 1447 ntBASIC10.78□□□□□ -0.68
Smim1P0C8K7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms