Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Gm12821-201ENSMUST00000120022 600 ntBASIC11.06□□□□□ -0.64
Hbb-b1P02088 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.06□□□□□ -0.64
Hbb-b1P02088 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Hbb-b1P02088 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hbb-b1P02088 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hbb-b1P02088 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Hbb-b1P02088 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Hbb-b1P02088 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hbb-b1P02088 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hbb-b1P02088 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hbb-b1P02088 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hbb-b1P02088 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hbb-b1P02088 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hbb-b1P02088 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hbb-b1P02088 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hbb-b1P02088 Gm45417-201ENSMUST00000209533 758 ntBASIC11.05□□□□□ -0.64
Hbb-b1P02088 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hbb-b1P02088 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hbb-b1P02088 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.05□□□□□ -0.64
Hbb-b1P02088 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.05□□□□□ -0.64
Hbb-b1P02088 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hbb-b1P02088 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hbb-b1P02088 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.05□□□□□ -0.64
Hbb-b1P02088 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hbb-b1P02088 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC11.05□□□□□ -0.64
Hbb-b1P02088 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Efs-202ENSMUST00000227037 2540 ntBASIC11.04□□□□□ -0.64
Hbb-b1P02088 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC11.04□□□□□ -0.64
Hbb-b1P02088 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Cdc34b-202ENSMUST00000188741 1252 ntBASIC11.04□□□□□ -0.64
Hbb-b1P02088 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.04□□□□□ -0.64
Hbb-b1P02088 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hbb-b1P02088 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.03□□□□□ -0.64
Hbb-b1P02088 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms