Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.45□□□□□ -0.58
TcraP01849 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Gm20760-201ENSMUST00000179197 648 ntBASIC11.45□□□□□ -0.58
TcraP01849 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.45□□□□□ -0.58
TcraP01849 Gm37025-201ENSMUST00000195159 829 ntBASIC11.45□□□□□ -0.58
TcraP01849 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC11.45□□□□□ -0.58
TcraP01849 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC11.45□□□□□ -0.58
TcraP01849 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
TcraP01849 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
TcraP01849 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.45□□□□□ -0.58
TcraP01849 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
TcraP01849 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
TcraP01849 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TcraP01849 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
TcraP01849 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.44□□□□□ -0.58
TcraP01849 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 BC037039-201ENSMUST00000192003 2205 ntBASIC11.44□□□□□ -0.58
TcraP01849 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
TcraP01849 Gm5643-201ENSMUST00000117081 966 ntBASIC11.44□□□□□ -0.58
TcraP01849 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
TcraP01849 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11.44□□□□□ -0.58
TcraP01849 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
TcraP01849 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
TcraP01849 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.44□□□□□ -0.58
TcraP01849 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TcraP01849 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.44□□□□□ -0.58
TcraP01849 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.43□□□□□ -0.58
TcraP01849 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.43□□□□□ -0.58
TcraP01849 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
TcraP01849 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
TcraP01849 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 CT025689.6-201ENSMUST00000224991 1104 ntBASIC11.43□□□□□ -0.58
TcraP01849 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.43□□□□□ -0.58
TcraP01849 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TcraP01849 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
TcraP01849 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TcraP01849 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.42□□□□□ -0.58
TcraP01849 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.42□□□□□ -0.58
TcraP01849 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms