Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.06■□□□□ 0.16
Syn1O88935 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Syn1O88935 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Syn1O88935 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Syn1O88935 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Syn1O88935 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Syn1O88935 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Syn1O88935 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Syn1O88935 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.05■□□□□ 0.16
Syn1O88935 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Syn1O88935 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.05■□□□□ 0.16
Syn1O88935 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Syn1O88935 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Syn1O88935 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Syn1O88935 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.05■□□□□ 0.16
Syn1O88935 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syn1O88935 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Syn1O88935 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Syn1O88935 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Syn1O88935 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Syn1O88935 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Syn1O88935 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Syn1O88935 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Syn1O88935 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Syn1O88935 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Syn1O88935 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Syn1O88935 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.04■□□□□ 0.16
Syn1O88935 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.04■□□□□ 0.16
Syn1O88935 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Syn1O88935 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Syn1O88935 Rpph1-201ENSMUST00000175096 319 ntBASIC16.04■□□□□ 0.16
Syn1O88935 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Syn1O88935 Gm17837-201ENSMUST00000186435 985 ntBASIC16.04■□□□□ 0.16
Syn1O88935 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Syn1O88935 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Syn1O88935 Gm43433-201ENSMUST00000196573 481 ntBASIC16.04■□□□□ 0.16
Syn1O88935 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Syn1O88935 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.04■□□□□ 0.16
Syn1O88935 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
Syn1O88935 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Syn1O88935 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.04■□□□□ 0.16
Syn1O88935 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Syn1O88935 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Syn1O88935 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Syn1O88935 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Syn1O88935 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Syn1O88935 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Syn1O88935 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Syn1O88935 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Syn1O88935 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.03■□□□□ 0.16
Syn1O88935 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Syn1O88935 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Syn1O88935 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Syn1O88935 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Syn1O88935 Gm27618-201ENSMUST00000183671 60 ntBASIC16.03■□□□□ 0.16
Syn1O88935 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.03■□□□□ 0.16
Syn1O88935 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Syn1O88935 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Syn1O88935 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Syn1O88935 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Syn1O88935 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Syn1O88935 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Syn1O88935 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Syn1O88935 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Syn1O88935 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Syn1O88935 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Syn1O88935 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Syn1O88935 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Syn1O88935 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Syn1O88935 Grk6-207ENSMUST00000225925 2769 ntBASIC16.02■□□□□ 0.16
Syn1O88935 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Syn1O88935 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.02■□□□□ 0.16
Syn1O88935 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Syn1O88935 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Syn1O88935 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Syn1O88935 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.02■□□□□ 0.16
Syn1O88935 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.02■□□□□ 0.16
Syn1O88935 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.02■□□□□ 0.16
Syn1O88935 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.02■□□□□ 0.16
Syn1O88935 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Syn1O88935 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Syn1O88935 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms