Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm27646-201ENSMUST00000183989 110 ntBASIC13.4□□□□□ -0.26
Cldn1O88551 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.4□□□□□ -0.26
Cldn1O88551 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.4□□□□□ -0.26
Cldn1O88551 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cldn1O88551 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.4□□□□□ -0.26
Cldn1O88551 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldn1O88551 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldn1O88551 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.4□□□□□ -0.26
Cldn1O88551 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldn1O88551 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldn1O88551 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldn1O88551 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldn1O88551 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldn1O88551 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldn1O88551 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldn1O88551 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldn1O88551 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cldn1O88551 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldn1O88551 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cldn1O88551 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cldn1O88551 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldn1O88551 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldn1O88551 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cldn1O88551 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cldn1O88551 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldn1O88551 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldn1O88551 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cldn1O88551 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cldn1O88551 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cldn1O88551 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.39□□□□□ -0.27
Cldn1O88551 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.39□□□□□ -0.27
Cldn1O88551 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldn1O88551 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldn1O88551 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldn1O88551 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldn1O88551 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.39□□□□□ -0.27
Cldn1O88551 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cldn1O88551 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldn1O88551 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldn1O88551 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.39□□□□□ -0.27
Cldn1O88551 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cldn1O88551 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.39□□□□□ -0.27
Cldn1O88551 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldn1O88551 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cldn1O88551 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.38□□□□□ -0.27
Cldn1O88551 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.38□□□□□ -0.27
Cldn1O88551 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.38□□□□□ -0.27
Cldn1O88551 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.38□□□□□ -0.27
Cldn1O88551 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.38□□□□□ -0.27
Cldn1O88551 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Cldn1O88551 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.38□□□□□ -0.27
Cldn1O88551 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.38□□□□□ -0.27
Cldn1O88551 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.38□□□□□ -0.27
Cldn1O88551 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cldn1O88551 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.38□□□□□ -0.27
Cldn1O88551 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.38□□□□□ -0.27
Cldn1O88551 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.38□□□□□ -0.27
Cldn1O88551 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldn1O88551 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.37□□□□□ -0.27
Cldn1O88551 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cldn1O88551 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.37□□□□□ -0.27
Cldn1O88551 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cldn1O88551 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cldn1O88551 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.37□□□□□ -0.27
Cldn1O88551 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Cldn1O88551 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.37□□□□□ -0.27
Cldn1O88551 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms