Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pde6dO55057 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
Pde6dO55057 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pde6dO55057 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.37□□□□□ -0.43
Pde6dO55057 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Pde6dO55057 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Pde6dO55057 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pde6dO55057 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pde6dO55057 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.37□□□□□ -0.43
Pde6dO55057 Gm13186-201ENSMUST00000118031 316 ntBASIC12.37□□□□□ -0.43
Pde6dO55057 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pde6dO55057 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.37□□□□□ -0.43
Pde6dO55057 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.37□□□□□ -0.43
Pde6dO55057 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Pde6dO55057 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pde6dO55057 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.37□□□□□ -0.43
Pde6dO55057 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.37□□□□□ -0.43
Pde6dO55057 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6dO55057 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pde6dO55057 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pde6dO55057 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.36□□□□□ -0.43
Pde6dO55057 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Pde6dO55057 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.36□□□□□ -0.43
Pde6dO55057 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pde6dO55057 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6dO55057 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pde6dO55057 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.35□□□□□ -0.43
Pde6dO55057 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pde6dO55057 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6dO55057 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms