Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dkk1O54908 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Dkk1O54908 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dkk1O54908 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.9□□□□□ -0.18
Dkk1O54908 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dkk1O54908 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dkk1O54908 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.9□□□□□ -0.18
Dkk1O54908 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dkk1O54908 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dkk1O54908 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Dkk1O54908 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dkk1O54908 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Dkk1O54908 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dkk1O54908 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dkk1O54908 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Dkk1O54908 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Dkk1O54908 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.89□□□□□ -0.19
Dkk1O54908 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Dkk1O54908 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Dkk1O54908 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Dkk1O54908 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Dkk1O54908 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Dkk1O54908 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Dkk1O54908 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Dkk1O54908 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Dkk1O54908 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Dkk1O54908 AL929555.1-201ENSMUST00000215283 509 ntBASIC13.89□□□□□ -0.19
Dkk1O54908 AC174797.4-201ENSMUST00000225510 347 ntBASIC13.89□□□□□ -0.19
Dkk1O54908 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.89□□□□□ -0.19
Dkk1O54908 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Dkk1O54908 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Dkk1O54908 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Dkk1O54908 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Dkk1O54908 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Dkk1O54908 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Dkk1O54908 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Dkk1O54908 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Dkk1O54908 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Dkk1O54908 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.89□□□□□ -0.19
Dkk1O54908 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Dkk1O54908 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Dkk1O54908 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Dkk1O54908 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.88□□□□□ -0.19
Dkk1O54908 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Dkk1O54908 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Dkk1O54908 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Gm14859-201ENSMUST00000117752 357 ntBASIC13.88□□□□□ -0.19
Dkk1O54908 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC13.88□□□□□ -0.19
Dkk1O54908 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.88□□□□□ -0.19
Dkk1O54908 Mir3081-201ENSMUST00000175305 84 ntBASIC13.88□□□□□ -0.19
Dkk1O54908 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC13.88□□□□□ -0.19
Dkk1O54908 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.88□□□□□ -0.19
Dkk1O54908 Gm19174-201ENSMUST00000216944 956 ntBASIC13.88□□□□□ -0.19
Dkk1O54908 CT572999.1-201ENSMUST00000220315 1260 ntBASIC13.88□□□□□ -0.19
Dkk1O54908 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.88□□□□□ -0.19
Dkk1O54908 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC13.88□□□□□ -0.19
Dkk1O54908 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Dkk1O54908 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Dkk1O54908 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Dkk1O54908 Gm9575-201ENSMUST00000122140 1339 ntBASIC13.88□□□□□ -0.19
Dkk1O54908 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Dkk1O54908 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Dkk1O54908 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Dkk1O54908 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Dkk1O54908 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Dkk1O54908 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.87□□□□□ -0.19
Dkk1O54908 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Dkk1O54908 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Dkk1O54908 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Dkk1O54908 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Dkk1O54908 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Dkk1O54908 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Dkk1O54908 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Dkk1O54908 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Dkk1O54908 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Dkk1O54908 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Dkk1O54908 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Dkk1O54908 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms