Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccr6O54689 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr6O54689 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccr6O54689 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Ccr6O54689 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr6O54689 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr6O54689 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccr6O54689 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccr6O54689 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.15□□□□□ -0.3
Ccr6O54689 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccr6O54689 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ccr6O54689 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ccr6O54689 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccr6O54689 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.15□□□□□ -0.3
Ccr6O54689 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.15□□□□□ -0.3
Ccr6O54689 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccr6O54689 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccr6O54689 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccr6O54689 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.15□□□□□ -0.3
Ccr6O54689 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccr6O54689 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Ccr6O54689 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccr6O54689 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccr6O54689 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccr6O54689 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ccr6O54689 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ccr6O54689 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ccr6O54689 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ccr6O54689 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ccr6O54689 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ccr6O54689 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.14□□□□□ -0.31
Ccr6O54689 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ccr6O54689 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ccr6O54689 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ccr6O54689 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccr6O54689 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ccr6O54689 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr6O54689 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccr6O54689 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Ccr6O54689 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ccr6O54689 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccr6O54689 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.13□□□□□ -0.31
Ccr6O54689 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccr6O54689 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Ccr6O54689 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.13□□□□□ -0.31
Ccr6O54689 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
Ccr6O54689 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ccr6O54689 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccr6O54689 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms