Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Matn3O35701 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.25□□□□□ -0.13
Matn3O35701 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.25□□□□□ -0.13
Matn3O35701 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Matn3O35701 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Matn3O35701 Gm37055-201ENSMUST00000191866 133 ntBASIC14.25□□□□□ -0.13
Matn3O35701 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Matn3O35701 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Matn3O35701 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Matn3O35701 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.25□□□□□ -0.13
Matn3O35701 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Matn3O35701 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Matn3O35701 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Matn3O35701 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Matn3O35701 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Matn3O35701 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Matn3O35701 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Matn3O35701 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Matn3O35701 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Matn3O35701 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.24□□□□□ -0.13
Matn3O35701 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Matn3O35701 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Matn3O35701 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Matn3O35701 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Matn3O35701 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Matn3O35701 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Matn3O35701 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Matn3O35701 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.24□□□□□ -0.13
Matn3O35701 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.24□□□□□ -0.13
Matn3O35701 Gm12134-201ENSMUST00000122109 520 ntBASIC14.24□□□□□ -0.13
Matn3O35701 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.24□□□□□ -0.13
Matn3O35701 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Matn3O35701 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Matn3O35701 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Matn3O35701 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Matn3O35701 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Matn3O35701 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Matn3O35701 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Matn3O35701 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Matn3O35701 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Matn3O35701 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Matn3O35701 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Matn3O35701 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Matn3O35701 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Matn3O35701 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Matn3O35701 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Matn3O35701 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Matn3O35701 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Matn3O35701 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.24□□□□□ -0.13
Matn3O35701 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Matn3O35701 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Matn3O35701 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Matn3O35701 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Matn3O35701 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Matn3O35701 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Matn3O35701 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Matn3O35701 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Matn3O35701 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Matn3O35701 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Matn3O35701 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Matn3O35701 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.23□□□□□ -0.13
Matn3O35701 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.23□□□□□ -0.13
Matn3O35701 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Matn3O35701 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.23□□□□□ -0.13
Matn3O35701 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Matn3O35701 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Matn3O35701 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Matn3O35701 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Matn3O35701 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Matn3O35701 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Matn3O35701 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.23□□□□□ -0.13
Matn3O35701 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Matn3O35701 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Matn3O35701 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Matn3O35701 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Matn3O35701 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Matn3O35701 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.22□□□□□ -0.13
Matn3O35701 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.22□□□□□ -0.13
Matn3O35701 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.22□□□□□ -0.13
Matn3O35701 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Matn3O35701 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Matn3O35701 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms