Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC23.81■■□□□ 1.4
Polr1aO35134 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Polr1aO35134 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Polr1aO35134 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC23.8■■□□□ 1.4
Polr1aO35134 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Polr1aO35134 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Polr1aO35134 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Polr1aO35134 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Polr1aO35134 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC23.8■■□□□ 1.4
Polr1aO35134 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC23.8■■□□□ 1.4
Polr1aO35134 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC23.8■■□□□ 1.4
Polr1aO35134 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Polr1aO35134 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Polr1aO35134 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Polr1aO35134 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Polr1aO35134 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Polr1aO35134 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Polr1aO35134 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Polr1aO35134 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Polr1aO35134 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Polr1aO35134 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Polr1aO35134 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC23.79■■□□□ 1.4
Polr1aO35134 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Polr1aO35134 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Polr1aO35134 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
Polr1aO35134 Gm38225-201ENSMUST00000194001 393 ntBASIC23.79■■□□□ 1.4
Polr1aO35134 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Polr1aO35134 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Polr1aO35134 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Polr1aO35134 Gm26596-201ENSMUST00000180464 2655 ntBASIC23.78■■□□□ 1.4
Polr1aO35134 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Polr1aO35134 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Polr1aO35134 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC23.78■■□□□ 1.4
Polr1aO35134 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Polr1aO35134 Klk2-ps-201ENSMUST00000205342 571 ntBASIC23.78■■□□□ 1.4
Polr1aO35134 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC23.78■■□□□ 1.4
Polr1aO35134 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Polr1aO35134 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Polr1aO35134 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Polr1aO35134 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Polr1aO35134 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Polr1aO35134 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Polr1aO35134 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Polr1aO35134 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Polr1aO35134 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Polr1aO35134 Gm18049-201ENSMUST00000208909 581 ntBASIC23.77■■□□□ 1.4
Polr1aO35134 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Polr1aO35134 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
Polr1aO35134 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Polr1aO35134 AC131743.5-201ENSMUST00000220775 1618 ntBASIC23.77■■□□□ 1.4
Polr1aO35134 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Polr1aO35134 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
Polr1aO35134 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC23.76■■□□□ 1.39
Polr1aO35134 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC23.76■■□□□ 1.39
Polr1aO35134 Mir8102-201ENSMUST00000184148 139 ntBASIC23.76■■□□□ 1.39
Polr1aO35134 Gm17837-201ENSMUST00000186435 985 ntBASIC23.76■■□□□ 1.39
Polr1aO35134 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC23.76■■□□□ 1.39
Polr1aO35134 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Polr1aO35134 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Polr1aO35134 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Polr1aO35134 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Polr1aO35134 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Polr1aO35134 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Polr1aO35134 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
Polr1aO35134 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC23.76■■□□□ 1.39
Polr1aO35134 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
Polr1aO35134 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Polr1aO35134 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Polr1aO35134 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Polr1aO35134 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Polr1aO35134 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC23.75■■□□□ 1.39
Polr1aO35134 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Polr1aO35134 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Polr1aO35134 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Polr1aO35134 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Polr1aO35134 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Polr1aO35134 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Polr1aO35134 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Polr1aO35134 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Polr1aO35134 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Polr1aO35134 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Polr1aO35134 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Polr1aO35134 Gm13823-201ENSMUST00000119930 345 ntBASIC23.74■■□□□ 1.39
Polr1aO35134 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Polr1aO35134 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Polr1aO35134 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Polr1aO35134 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC23.74■■□□□ 1.39
Polr1aO35134 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Polr1aO35134 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Polr1aO35134 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Polr1aO35134 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Polr1aO35134 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Polr1aO35134 Gm2423-201ENSMUST00000074863 733 ntBASIC23.73■■□□□ 1.39
Polr1aO35134 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC23.73■■□□□ 1.39
Polr1aO35134 Gm13517-201ENSMUST00000120782 1495 ntBASIC23.73■■□□□ 1.39
Polr1aO35134 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Polr1aO35134 Ntrk2-205ENSMUST00000224402 2284 ntBASIC23.73■■□□□ 1.39
Polr1aO35134 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Polr1aO35134 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC23.73■■□□□ 1.39
Polr1aO35134 Gm14767-201ENSMUST00000121559 586 ntBASIC23.73■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms