Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trove2O08848 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trove2O08848 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trove2O08848 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trove2O08848 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trove2O08848 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trove2O08848 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trove2O08848 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trove2O08848 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.07■□□□□ 0.16
Trove2O08848 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.07■□□□□ 0.16
Trove2O08848 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trove2O08848 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trove2O08848 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trove2O08848 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trove2O08848 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trove2O08848 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trove2O08848 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Trove2O08848 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trove2O08848 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trove2O08848 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trove2O08848 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trove2O08848 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.07■□□□□ 0.16
Trove2O08848 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trove2O08848 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trove2O08848 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trove2O08848 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trove2O08848 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trove2O08848 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
Trove2O08848 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trove2O08848 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trove2O08848 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trove2O08848 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.06■□□□□ 0.16
Trove2O08848 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trove2O08848 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trove2O08848 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.06■□□□□ 0.16
Trove2O08848 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trove2O08848 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trove2O08848 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trove2O08848 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trove2O08848 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Trove2O08848 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.06■□□□□ 0.16
Trove2O08848 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.06■□□□□ 0.16
Trove2O08848 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Trove2O08848 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trove2O08848 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trove2O08848 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trove2O08848 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trove2O08848 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trove2O08848 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trove2O08848 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.06■□□□□ 0.16
Trove2O08848 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trove2O08848 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Trove2O08848 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.05■□□□□ 0.16
Trove2O08848 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.05■□□□□ 0.16
Trove2O08848 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.05■□□□□ 0.16
Trove2O08848 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trove2O08848 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.05■□□□□ 0.16
Trove2O08848 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.05■□□□□ 0.16
Trove2O08848 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trove2O08848 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Gm10566-201ENSMUST00000086739 996 ntBASIC16.05■□□□□ 0.16
Trove2O08848 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trove2O08848 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.05■□□□□ 0.16
Trove2O08848 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.05■□□□□ 0.16
Trove2O08848 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.05■□□□□ 0.16
Trove2O08848 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trove2O08848 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trove2O08848 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trove2O08848 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trove2O08848 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trove2O08848 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trove2O08848 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.04■□□□□ 0.16
Trove2O08848 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trove2O08848 Gm26039-201ENSMUST00000158152 144 ntBASIC16.04■□□□□ 0.16
Trove2O08848 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trove2O08848 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms