Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shisa8J3QNX5 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Efs-202ENSMUST00000227037 2540 ntBASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Gm5417-201ENSMUST00000079706 384 ntBASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.28□□□□□ -0.12
Shisa8J3QNX5 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shisa8J3QNX5 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.27□□□□□ -0.12
Shisa8J3QNX5 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shisa8J3QNX5 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shisa8J3QNX5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shisa8J3QNX5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Shisa8J3QNX5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shisa8J3QNX5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shisa8J3QNX5 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shisa8J3QNX5 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shisa8J3QNX5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shisa8J3QNX5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shisa8J3QNX5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.27□□□□□ -0.13
Shisa8J3QNX5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.27□□□□□ -0.13
Shisa8J3QNX5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shisa8J3QNX5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shisa8J3QNX5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Shisa8J3QNX5 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shisa8J3QNX5 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shisa8J3QNX5 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shisa8J3QNX5 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shisa8J3QNX5 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Shisa8J3QNX5 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Shisa8J3QNX5 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shisa8J3QNX5 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.27□□□□□ -0.13
Shisa8J3QNX5 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shisa8J3QNX5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Shisa8J3QNX5 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Gm16061-201ENSMUST00000122167 857 ntBASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Gm2274-201ENSMUST00000184539 609 ntBASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms