Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Gm45167-201ENSMUST00000208007 322 ntBASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.2■□□□□ 0.34
R3hdm1E9Q9Q2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Gm27300-201ENSMUST00000184085 97 ntBASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Gm27335-201ENSMUST00000184758 97 ntBASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
R3hdm1E9Q9Q2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
R3hdm1E9Q9Q2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
R3hdm1E9Q9Q2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
R3hdm1E9Q9Q2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
R3hdm1E9Q9Q2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
R3hdm1E9Q9Q2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
R3hdm1E9Q9Q2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.18■□□□□ 0.34
R3hdm1E9Q9Q2 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.18■□□□□ 0.34
R3hdm1E9Q9Q2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.18■□□□□ 0.34
R3hdm1E9Q9Q2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
R3hdm1E9Q9Q2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
R3hdm1E9Q9Q2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
R3hdm1E9Q9Q2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.18■□□□□ 0.34
R3hdm1E9Q9Q2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.18■□□□□ 0.34
R3hdm1E9Q9Q2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
R3hdm1E9Q9Q2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
R3hdm1E9Q9Q2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
R3hdm1E9Q9Q2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
R3hdm1E9Q9Q2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 Gm44492-201ENSMUST00000197012 141 ntBASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
R3hdm1E9Q9Q2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
R3hdm1E9Q9Q2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms