Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc141E9Q8Q6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc141E9Q8Q6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc141E9Q8Q6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc141E9Q8Q6 Gm13233-201ENSMUST00000118760 1443 ntBASIC23.28■■□□□ 1.32
Ccdc141E9Q8Q6 Gm13244-201ENSMUST00000118855 1446 ntBASIC23.28■■□□□ 1.32
Ccdc141E9Q8Q6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc141E9Q8Q6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc141E9Q8Q6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
Ccdc141E9Q8Q6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc141E9Q8Q6 Gm27533-201ENSMUST00000183800 152 ntBASIC23.28■■□□□ 1.32
Ccdc141E9Q8Q6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Ccdc141E9Q8Q6 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC23.28■■□□□ 1.32
Ccdc141E9Q8Q6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Ccdc141E9Q8Q6 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC23.28■■□□□ 1.32
Ccdc141E9Q8Q6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Gm3365-201ENSMUST00000216296 1480 ntBASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc141E9Q8Q6 Gm14026-201ENSMUST00000120625 1789 ntBASIC23.27■■□□□ 1.31
Ccdc141E9Q8Q6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc141E9Q8Q6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc141E9Q8Q6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc141E9Q8Q6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc141E9Q8Q6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc141E9Q8Q6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc141E9Q8Q6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Ccdc141E9Q8Q6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc141E9Q8Q6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc141E9Q8Q6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc141E9Q8Q6 CT010506.4-201ENSMUST00000225457 351 ntBASIC23.26■■□□□ 1.31
Ccdc141E9Q8Q6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Ccdc141E9Q8Q6 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC23.26■■□□□ 1.31
Ccdc141E9Q8Q6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc141E9Q8Q6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc141E9Q8Q6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc141E9Q8Q6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc141E9Q8Q6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ccdc141E9Q8Q6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC23.25■■□□□ 1.31
Ccdc141E9Q8Q6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC23.25■■□□□ 1.31
Ccdc141E9Q8Q6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC23.25■■□□□ 1.31
Ccdc141E9Q8Q6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ccdc141E9Q8Q6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Ccdc141E9Q8Q6 Gm24694-201ENSMUST00000180054 110 ntBASIC23.25■■□□□ 1.31
Ccdc141E9Q8Q6 Gm27663-201ENSMUST00000184839 110 ntBASIC23.25■■□□□ 1.31
Ccdc141E9Q8Q6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ccdc141E9Q8Q6 Gm44344-201ENSMUST00000200287 129 ntBASIC23.25■■□□□ 1.31
Ccdc141E9Q8Q6 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ccdc141E9Q8Q6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ccdc141E9Q8Q6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ccdc141E9Q8Q6 CT009510.1-201ENSMUST00000227972 270 ntBASIC23.24■■□□□ 1.31
Ccdc141E9Q8Q6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC23.24■■□□□ 1.31
Ccdc141E9Q8Q6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ccdc141E9Q8Q6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
Ccdc141E9Q8Q6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ccdc141E9Q8Q6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ccdc141E9Q8Q6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ccdc141E9Q8Q6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Ccdc141E9Q8Q6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ccdc141E9Q8Q6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC23.24■■□□□ 1.31
Ccdc141E9Q8Q6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ccdc141E9Q8Q6 Syt7-204ENSMUST00000223586 1344 ntBASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 AC135669.1-201ENSMUST00000213585 412 ntBASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 Syt7-205ENSMUST00000224135 1557 ntBASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC23.23■■□□□ 1.31
Ccdc141E9Q8Q6 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms