Protein–RNA interactions for Protein: E9PUP1

Syde2, Synapse defective 1, Rho GTPase, homolog 2 (C. elegans), mousemouse

Predictions only

Length 1,314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syde2E9PUP1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.44■□□□□ 0.7
Syde2E9PUP1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syde2E9PUP1 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Rprl2-201ENSMUST00000157150 290 ntBASIC19.44■□□□□ 0.7
Syde2E9PUP1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Syde2E9PUP1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syde2E9PUP1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syde2E9PUP1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syde2E9PUP1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syde2E9PUP1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Syde2E9PUP1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.43■□□□□ 0.7
Syde2E9PUP1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syde2E9PUP1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Syde2E9PUP1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syde2E9PUP1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syde2E9PUP1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.43■□□□□ 0.7
Syde2E9PUP1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC19.43■□□□□ 0.7
Syde2E9PUP1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Syde2E9PUP1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syde2E9PUP1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syde2E9PUP1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syde2E9PUP1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Syde2E9PUP1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Syde2E9PUP1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syde2E9PUP1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Syde2E9PUP1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syde2E9PUP1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.42■□□□□ 0.7
Syde2E9PUP1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syde2E9PUP1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Syde2E9PUP1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Syde2E9PUP1 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Syde2E9PUP1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syde2E9PUP1 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.42■□□□□ 0.7
Syde2E9PUP1 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syde2E9PUP1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Syde2E9PUP1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC19.42■□□□□ 0.7
Syde2E9PUP1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Syde2E9PUP1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Syde2E9PUP1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Syde2E9PUP1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syde2E9PUP1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syde2E9PUP1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Syde2E9PUP1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syde2E9PUP1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syde2E9PUP1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.41■□□□□ 0.7
Syde2E9PUP1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syde2E9PUP1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Syde2E9PUP1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syde2E9PUP1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syde2E9PUP1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Syde2E9PUP1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Syde2E9PUP1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC19.41■□□□□ 0.7
Syde2E9PUP1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syde2E9PUP1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Syde2E9PUP1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Syde2E9PUP1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syde2E9PUP1 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.4■□□□□ 0.7
Syde2E9PUP1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syde2E9PUP1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syde2E9PUP1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syde2E9PUP1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syde2E9PUP1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Syde2E9PUP1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syde2E9PUP1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC19.4■□□□□ 0.7
Syde2E9PUP1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC19.4■□□□□ 0.7
Syde2E9PUP1 Gm10499-201ENSMUST00000174094 934 ntBASIC19.4■□□□□ 0.7
Syde2E9PUP1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syde2E9PUP1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.4■□□□□ 0.7
Syde2E9PUP1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syde2E9PUP1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syde2E9PUP1 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.4■□□□□ 0.7
Syde2E9PUP1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syde2E9PUP1 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.4■□□□□ 0.7
Syde2E9PUP1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syde2E9PUP1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syde2E9PUP1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Syde2E9PUP1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms