Protein–RNA interactions for Protein: B1AUC4

Ube2u, Ubiquitin-conjugating enzyme E2U (putative), mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2uB1AUC4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ube2uB1AUC4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Ube2uB1AUC4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ube2uB1AUC4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC23.3■■□□□ 1.32
Ube2uB1AUC4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 AV026068-213ENSMUST00000223675 1171 ntBASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ube2uB1AUC4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ube2uB1AUC4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ube2uB1AUC4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Ube2uB1AUC4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ube2uB1AUC4 Gm7222-201ENSMUST00000117512 906 ntBASIC23.28■■□□□ 1.32
Ube2uB1AUC4 Gm6184-201ENSMUST00000120403 1261 ntBASIC23.28■■□□□ 1.32
Ube2uB1AUC4 AC125117.2-201ENSMUST00000228344 1140 ntBASIC23.28■■□□□ 1.32
Ube2uB1AUC4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ube2uB1AUC4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ube2uB1AUC4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ube2uB1AUC4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Ube2uB1AUC4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ube2uB1AUC4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ube2uB1AUC4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ube2uB1AUC4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Ube2uB1AUC4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ube2uB1AUC4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ube2uB1AUC4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ube2uB1AUC4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ube2uB1AUC4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC23.27■■□□□ 1.32
Ube2uB1AUC4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ube2uB1AUC4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ube2uB1AUC4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Ube2uB1AUC4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ube2uB1AUC4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ube2uB1AUC4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Gm8784-201ENSMUST00000222096 1435 ntBASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Gm10652-201ENSMUST00000199790 2622 ntBASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ube2uB1AUC4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ube2uB1AUC4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Ube2uB1AUC4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ube2uB1AUC4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ube2uB1AUC4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ube2uB1AUC4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms