Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Mir8117-201ENSMUST00000184773 107 ntBASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Gm8655-201ENSMUST00000221159 852 ntBASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Gm4459-201ENSMUST00000118750 468 ntBASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Mir3113-201ENSMUST00000175478 76 ntBASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Sh2d4bA6X942 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d4bA6X942 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.26
Sh2d4bA6X942 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sh2d4bA6X942 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4bA6X942 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms