Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm3854A0A1B0GSS6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm3854A0A1B0GSS6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.61■□□□□ 0.09
Gm3854A0A1B0GSS6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Gm3854A0A1B0GSS6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3854A0A1B0GSS6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Gm15427-201ENSMUST00000117288 531 ntBASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Gm44872-201ENSMUST00000207864 420 ntBASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Gm3854A0A1B0GSS6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Gm3854A0A1B0GSS6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Gm3854A0A1B0GSS6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Gm3854A0A1B0GSS6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Gm3854A0A1B0GSS6 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.58■□□□□ 0.09
Gm3854A0A1B0GSS6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Gm3854A0A1B0GSS6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Gm3854A0A1B0GSS6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm13216-201ENSMUST00000117145 591 ntBASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm14057-201ENSMUST00000120631 482 ntBASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm18246-201ENSMUST00000221023 728 ntBASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Gm3854A0A1B0GSS6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms