Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Gm11860-201ENSMUST00000122346 1010 ntBASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Gm18101-201ENSMUST00000215769 548 ntBASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Gm43598-201ENSMUST00000202482 2479 ntBASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv29A0A0G2LB96 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trbv29A0A0G2LB96 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Gm9987-201ENSMUST00000069768 567 ntBASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.98□□□□□ -0.33
Trbv29A0A0G2LB96 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms