Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.58□□□□□ -0.4
Trbv19A0A0B4J1H4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv19A0A0B4J1H4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trbv19A0A0B4J1H4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv19A0A0B4J1H4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.58□□□□□ -0.4
Trbv19A0A0B4J1H4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv19A0A0B4J1H4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv19A0A0B4J1H4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv19A0A0B4J1H4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv19A0A0B4J1H4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv19A0A0B4J1H4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Trbv19A0A0B4J1H4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv19A0A0B4J1H4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.58□□□□□ -0.4
Trbv19A0A0B4J1H4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv19A0A0B4J1H4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Gm15794-201ENSMUST00000120182 631 ntBASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv19A0A0B4J1H4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 AA414768-201ENSMUST00000121924 1257 ntBASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Gm6659-201ENSMUST00000174752 547 ntBASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv19A0A0B4J1H4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv19A0A0B4J1H4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms