Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbc1A0A0A6YWV4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbc1A0A0A6YWV4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Mir8098-201ENSMUST00000184011 137 ntBASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbc1A0A0A6YWV4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms