Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Trav6d-5A0A075B6B9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav6d-5A0A075B6B9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav6d-5A0A075B6B9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-5A0A075B6B9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm715-201ENSMUST00000117865 831 ntBASIC12.62□□□□□ -0.39
Trav6d-5A0A075B6B9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms