Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Gm2559-201ENSMUST00000201323 363 ntBASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav8-1A0A075B641 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Gm13148-201ENSMUST00000118892 745 ntBASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Gm44672-201ENSMUST00000206944 1098 ntBASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav8-1A0A075B641 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Gm10849-201ENSMUST00000100397 618 ntBASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Gm26571-201ENSMUST00000181399 666 ntBASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms