Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Gm18958-201ENSMUST00000174258 762 ntBASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Gm36967-201ENSMUST00000193814 266 ntBASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Gm6190-201ENSMUST00000220683 1374 ntBASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Gm21451-201ENSMUST00000111062 2775 ntBASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4n-4A0A075B615 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Camk2g-217ENSMUST00000226630 1937 ntBASIC10.86□□□□□ -0.67
Trav4n-4A0A075B615 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms