Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm13559-201ENSMUST00000120476 863 ntBASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.57□□□□□ -0.4
Trav6-1A0A075B5Z8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm7367-201ENSMUST00000057611 492 ntBASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-1A0A075B5Z8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms