Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chaf1aQ9QWF0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Chaf1aQ9QWF0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chaf1aQ9QWF0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Chaf1aQ9QWF0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.58■□□□□ 0.41
Chaf1aQ9QWF0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chaf1aQ9QWF0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Chaf1aQ9QWF0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chaf1aQ9QWF0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Chaf1aQ9QWF0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chaf1aQ9QWF0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chaf1aQ9QWF0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chaf1aQ9QWF0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chaf1aQ9QWF0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.58■□□□□ 0.4
Chaf1aQ9QWF0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Chaf1aQ9QWF0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chaf1aQ9QWF0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chaf1aQ9QWF0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chaf1aQ9QWF0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chaf1aQ9QWF0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chaf1aQ9QWF0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chaf1aQ9QWF0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chaf1aQ9QWF0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chaf1aQ9QWF0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.58■□□□□ 0.4
Chaf1aQ9QWF0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Sybu-209ENSMUST00000228639 4113 ntBASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1aQ9QWF0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Chaf1aQ9QWF0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.55■□□□□ 0.4
Chaf1aQ9QWF0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1aQ9QWF0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1aQ9QWF0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1aQ9QWF0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1aQ9QWF0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1aQ9QWF0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Chaf1aQ9QWF0 Gm10052-201ENSMUST00000168019 960 ntBASIC17.55■□□□□ 0.4
Chaf1aQ9QWF0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.55■□□□□ 0.4
Chaf1aQ9QWF0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1aQ9QWF0 Gm7729-201ENSMUST00000050143 801 ntBASIC17.55■□□□□ 0.4
Chaf1aQ9QWF0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1aQ9QWF0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1aQ9QWF0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1aQ9QWF0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1aQ9QWF0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1aQ9QWF0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.55■□□□□ 0.4
Chaf1aQ9QWF0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1aQ9QWF0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms