Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem1Q9JKE2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Rab3c-203ENSMUST00000224180 967 ntBASIC14.1□□□□□ -0.15
Trem1Q9JKE2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem1Q9JKE2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem1Q9JKE2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem1Q9JKE2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem1Q9JKE2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem1Q9JKE2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem1Q9JKE2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trem1Q9JKE2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trem1Q9JKE2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trem1Q9JKE2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.09□□□□□ -0.15
Trem1Q9JKE2 Mir6349-201ENSMUST00000184059 97 ntBASIC14.09□□□□□ -0.15
Trem1Q9JKE2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem1Q9JKE2 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trem1Q9JKE2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem1Q9JKE2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem1Q9JKE2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem1Q9JKE2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem1Q9JKE2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem1Q9JKE2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.08□□□□□ -0.15
Trem1Q9JKE2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.08□□□□□ -0.15
Trem1Q9JKE2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.08□□□□□ -0.15
Trem1Q9JKE2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem1Q9JKE2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms