Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cacna1fQ9JIS7 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1fQ9JIS7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cacna1fQ9JIS7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.66■□□□□ 0.42
Cacna1fQ9JIS7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cacna1fQ9JIS7 Gm13015-201ENSMUST00000118674 204 ntBASIC17.65■□□□□ 0.42
Cacna1fQ9JIS7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.65■□□□□ 0.42
Cacna1fQ9JIS7 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1fQ9JIS7 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1fQ9JIS7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1fQ9JIS7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1fQ9JIS7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1fQ9JIS7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1fQ9JIS7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cacna1fQ9JIS7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.65■□□□□ 0.42
Cacna1fQ9JIS7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1fQ9JIS7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
Cacna1fQ9JIS7 Gm18737-201ENSMUST00000173594 937 ntBASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1fQ9JIS7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.63■□□□□ 0.41
Cacna1fQ9JIS7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1fQ9JIS7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1fQ9JIS7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1fQ9JIS7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.63■□□□□ 0.41
Cacna1fQ9JIS7 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.63■□□□□ 0.41
Cacna1fQ9JIS7 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1fQ9JIS7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1fQ9JIS7 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1fQ9JIS7 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1fQ9JIS7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.63■□□□□ 0.41
Cacna1fQ9JIS7 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1fQ9JIS7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1fQ9JIS7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1fQ9JIS7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1fQ9JIS7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1fQ9JIS7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Gm27680-201ENSMUST00000184192 160 ntBASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.62■□□□□ 0.41
Cacna1fQ9JIS7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1fQ9JIS7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.61■□□□□ 0.41
Cacna1fQ9JIS7 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1fQ9JIS7 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.61■□□□□ 0.41
Cacna1fQ9JIS7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cacna1fQ9JIS7 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.61■□□□□ 0.41
Cacna1fQ9JIS7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1fQ9JIS7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1fQ9JIS7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1fQ9JIS7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1fQ9JIS7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1fQ9JIS7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1fQ9JIS7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms