Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Gm18958-201ENSMUST00000174258 762 ntBASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rhox4bQ9JI43 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Gm26571-201ENSMUST00000181399 666 ntBASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Rhox4bQ9JI43 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms