Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Gm24841-201ENSMUST00000158676 357 ntBASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Gm10698-201ENSMUST00000182663 604 ntBASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ube4bQ9ES00 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ube4bQ9ES00 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ube4bQ9ES00 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ube4bQ9ES00 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Ube4bQ9ES00 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ube4bQ9ES00 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ube4bQ9ES00 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Ube4bQ9ES00 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ube4bQ9ES00 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ube4bQ9ES00 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ube4bQ9ES00 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ube4bQ9ES00 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ube4bQ9ES00 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ube4bQ9ES00 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ube4bQ9ES00 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ube4bQ9ES00 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ube4bQ9ES00 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ube4bQ9ES00 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ube4bQ9ES00 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ube4bQ9ES00 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ube4bQ9ES00 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ube4bQ9ES00 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ube4bQ9ES00 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ube4bQ9ES00 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Ube4bQ9ES00 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.07■□□□□ 0
Ube4bQ9ES00 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ube4bQ9ES00 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.07■□□□□ 0
Ube4bQ9ES00 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4bQ9ES00 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ube4bQ9ES00 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ube4bQ9ES00 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms