Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Gm18025-201ENSMUST00000221733 862 ntBASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hmg20aQ9DC33 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmg20aQ9DC33 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmg20aQ9DC33 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms