Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.74
Chmp4bQ9D8B3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Asic1-205ENSMUST00000228185 1818 ntBASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 App-207ENSMUST00000227737 2827 ntBASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Gm19164-201ENSMUST00000210667 640 ntBASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Chmp4bQ9D8B3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4bQ9D8B3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Gm8344-201ENSMUST00000119813 856 ntBASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Gm27867-201ENSMUST00000184778 125 ntBASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Gm18669-201ENSMUST00000216049 778 ntBASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Gm8655-201ENSMUST00000221159 852 ntBASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4bQ9D8B3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4bQ9D8B3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms