Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap53Q9D439 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap53Q9D439 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap53Q9D439 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap53Q9D439 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cfap53Q9D439 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.21■□□□□ 0.35
Cfap53Q9D439 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.21■□□□□ 0.35
Cfap53Q9D439 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.21■□□□□ 0.35
Cfap53Q9D439 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.21■□□□□ 0.35
Cfap53Q9D439 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap53Q9D439 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap53Q9D439 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap53Q9D439 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap53Q9D439 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Cfap53Q9D439 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cfap53Q9D439 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Gm9172-201ENSMUST00000212092 954 ntBASIC17.2■□□□□ 0.34
Cfap53Q9D439 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap53Q9D439 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cfap53Q9D439 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap53Q9D439 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.19■□□□□ 0.34
Cfap53Q9D439 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap53Q9D439 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Gm21362-201ENSMUST00000194272 928 ntBASIC17.18■□□□□ 0.34
Cfap53Q9D439 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.18■□□□□ 0.34
Cfap53Q9D439 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cfap53Q9D439 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap53Q9D439 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap53Q9D439 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap53Q9D439 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cfap53Q9D439 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.17■□□□□ 0.34
Cfap53Q9D439 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms