Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snx29Q9D3S3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Gm18889-201ENSMUST00000174284 929 ntBASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx29Q9D3S3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Gm16198-201ENSMUST00000118766 670 ntBASIC17.11■□□□□ 0.33
Snx29Q9D3S3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx29Q9D3S3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Gm14057-201ENSMUST00000120631 482 ntBASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx29Q9D3S3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Gm9385-201ENSMUST00000117563 472 ntBASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms