Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Gm12134-201ENSMUST00000122109 520 ntBASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Gm45102-201ENSMUST00000207427 857 ntBASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Rps24-207ENSMUST00000224568 714 ntBASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn1Q9CWM4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pfdn1Q9CWM4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Pfdn1Q9CWM4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 Gm6420-201ENSMUST00000193885 723 ntBASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pfdn1Q9CWM4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Gm2399-201ENSMUST00000104944 225 ntBASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Zfp783-201ENSMUST00000095946 670 ntBASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pfdn1Q9CWM4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 BC037039-201ENSMUST00000192003 2205 ntBASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Gm11643-201ENSMUST00000119578 864 ntBASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms