Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smurf1Q9CUN6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.31□□□□□ -0.12
Smurf1Q9CUN6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smurf1Q9CUN6 Gm37055-201ENSMUST00000191866 133 ntBASIC14.31□□□□□ -0.12
Smurf1Q9CUN6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.31□□□□□ -0.12
Smurf1Q9CUN6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smurf1Q9CUN6 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smurf1Q9CUN6 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.31□□□□□ -0.12
Smurf1Q9CUN6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smurf1Q9CUN6 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Smurf1Q9CUN6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smurf1Q9CUN6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smurf1Q9CUN6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smurf1Q9CUN6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Smurf1Q9CUN6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smurf1Q9CUN6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Il3ra-202ENSMUST00000223589 738 ntBASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smurf1Q9CUN6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Mir5122-201ENSMUST00000175004 89 ntBASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Mir7071-201ENSMUST00000184847 69 ntBASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Odf3b-204ENSMUST00000227834 930 ntBASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smurf1Q9CUN6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smurf1Q9CUN6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smurf1Q9CUN6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smurf1Q9CUN6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smurf1Q9CUN6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smurf1Q9CUN6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Smurf1Q9CUN6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smurf1Q9CUN6 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.27□□□□□ -0.12
Smurf1Q9CUN6 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smurf1Q9CUN6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.27□□□□□ -0.13
Smurf1Q9CUN6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smurf1Q9CUN6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms