Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm7Q9CQQ8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Gm5682-201ENSMUST00000173402 505 ntBASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Gm7787-201ENSMUST00000216858 688 ntBASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm7Q9CQQ8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Gm12260-201ENSMUST00000122447 411 ntBASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm7Q9CQQ8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm7Q9CQQ8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.77■□□□□ 0.12
Lsm7Q9CQQ8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Lsm7Q9CQQ8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm7Q9CQQ8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm7Q9CQQ8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms