Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim11Q99PQ2 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.85■□□□□ 0.45
Trim11Q99PQ2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim11Q99PQ2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim11Q99PQ2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim11Q99PQ2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim11Q99PQ2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim11Q99PQ2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim11Q99PQ2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim11Q99PQ2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim11Q99PQ2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Gm27704-201ENSMUST00000185094 107 ntBASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim11Q99PQ2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim11Q99PQ2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trim11Q99PQ2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim11Q99PQ2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.83■□□□□ 0.45
Trim11Q99PQ2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trim11Q99PQ2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim11Q99PQ2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim11Q99PQ2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim11Q99PQ2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.83■□□□□ 0.44
Trim11Q99PQ2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.83■□□□□ 0.44
Trim11Q99PQ2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.83■□□□□ 0.44
Trim11Q99PQ2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim11Q99PQ2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim11Q99PQ2 Gm9172-201ENSMUST00000212092 954 ntBASIC17.83■□□□□ 0.44
Trim11Q99PQ2 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.83■□□□□ 0.44
Trim11Q99PQ2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim11Q99PQ2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim11Q99PQ2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim11Q99PQ2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim11Q99PQ2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim11Q99PQ2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim11Q99PQ2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim11Q99PQ2 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.83■□□□□ 0.44
Trim11Q99PQ2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim11Q99PQ2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim11Q99PQ2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim11Q99PQ2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim11Q99PQ2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim11Q99PQ2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim11Q99PQ2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim11Q99PQ2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim11Q99PQ2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim11Q99PQ2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim11Q99PQ2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim11Q99PQ2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim11Q99PQ2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim11Q99PQ2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
Trim11Q99PQ2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim11Q99PQ2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms