Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Gm18827-201ENSMUST00000188341 790 ntBASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Gm45384-201ENSMUST00000210451 277 ntBASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Gm16215-201ENSMUST00000161990 637 ntBASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Gm37153-201ENSMUST00000193637 231 ntBASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col25a1Q99MQ5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Gm20553-201ENSMUST00000204205 844 ntBASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Gm5779-201ENSMUST00000218467 910 ntBASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col25a1Q99MQ5 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Gm5177-201ENSMUST00000183092 997 ntBASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Gm17837-201ENSMUST00000186435 985 ntBASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms