Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb2Q91Y00 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb2Q91Y00 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb2Q91Y00 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb2Q91Y00 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhb2Q91Y00 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb2Q91Y00 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb2Q91Y00 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb2Q91Y00 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Gm15173-201ENSMUST00000122049 433 ntBASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Gm11780-201ENSMUST00000136880 516 ntBASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb2Q91Y00 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Gm6089-201ENSMUST00000197666 938 ntBASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb2Q91Y00 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb2Q91Y00 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdhb2Q91Y00 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb2Q91Y00 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb2Q91Y00 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb2Q91Y00 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb2Q91Y00 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb2Q91Y00 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb2Q91Y00 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb2Q91Y00 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhb2Q91Y00 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb2Q91Y00 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb2Q91Y00 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms