Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Gm6623-201ENSMUST00000173570 544 ntBASIC16.23■□□□□ 0.19
Trim60Q8VI40 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.23■□□□□ 0.19
Trim60Q8VI40 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim60Q8VI40 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim60Q8VI40 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim60Q8VI40 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim60Q8VI40 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.22■□□□□ 0.19
Trim60Q8VI40 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim60Q8VI40 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trim60Q8VI40 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Trim60Q8VI40 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim60Q8VI40 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim60Q8VI40 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim60Q8VI40 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim60Q8VI40 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trim60Q8VI40 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Trim60Q8VI40 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim60Q8VI40 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim60Q8VI40 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.2■□□□□ 0.18
Trim60Q8VI40 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim60Q8VI40 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim60Q8VI40 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.19■□□□□ 0.18
Trim60Q8VI40 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim60Q8VI40 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms