Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Gm6736-201ENSMUST00000166583 948 ntBASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx39aQ8VDW0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Mir3113-201ENSMUST00000175478 76 ntBASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Gm27397-201ENSMUST00000184997 107 ntBASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Gm43575-201ENSMUST00000196420 516 ntBASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Gm7787-201ENSMUST00000216858 688 ntBASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx39aQ8VDW0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Gm9682-201ENSMUST00000197505 556 ntBASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx39aQ8VDW0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ddx39aQ8VDW0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx39aQ8VDW0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.34■□□□□ 0.37
Ddx39aQ8VDW0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.34■□□□□ 0.37
Ddx39aQ8VDW0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx39aQ8VDW0 Gm24513-201ENSMUST00000174964 138 ntBASIC17.34■□□□□ 0.37
Ddx39aQ8VDW0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ddx39aQ8VDW0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx39aQ8VDW0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx39aQ8VDW0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx39aQ8VDW0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx39aQ8VDW0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx39aQ8VDW0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx39aQ8VDW0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx39aQ8VDW0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx39aQ8VDW0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx39aQ8VDW0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx39aQ8VDW0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx39aQ8VDW0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx39aQ8VDW0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx39aQ8VDW0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx39aQ8VDW0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms