Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx54Q8K4L0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx54Q8K4L0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx54Q8K4L0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ddx54Q8K4L0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Gm14719-201ENSMUST00000121891 340 ntBASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx54Q8K4L0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Ddx54Q8K4L0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx54Q8K4L0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx54Q8K4L0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx54Q8K4L0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx54Q8K4L0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx54Q8K4L0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx54Q8K4L0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.39■□□□□ 0.85
Ddx54Q8K4L0 Syt7-204ENSMUST00000223586 1344 ntBASIC20.39■□□□□ 0.85
Ddx54Q8K4L0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx54Q8K4L0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC20.39■□□□□ 0.85
Ddx54Q8K4L0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC20.39■□□□□ 0.85
Ddx54Q8K4L0 Gm2810-201ENSMUST00000118681 990 ntBASIC20.39■□□□□ 0.85
Ddx54Q8K4L0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ddx54Q8K4L0 Gm38225-201ENSMUST00000194001 393 ntBASIC20.39■□□□□ 0.85
Ddx54Q8K4L0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx54Q8K4L0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx54Q8K4L0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx54Q8K4L0 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.39■□□□□ 0.85
Ddx54Q8K4L0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx54Q8K4L0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms