Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Gm27301-201ENSMUST00000184012 127 ntBASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Alms1Q8K4E0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Gm37153-201ENSMUST00000193637 231 ntBASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Gm18622-201ENSMUST00000219361 595 ntBASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Gm20553-201ENSMUST00000204205 844 ntBASIC15.25■□□□□ 0.03
Alms1Q8K4E0 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Gm2423-201ENSMUST00000074863 733 ntBASIC15.25■□□□□ 0.03
Alms1Q8K4E0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Gm27622-201ENSMUST00000183779 60 ntBASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 App-207ENSMUST00000227737 2827 ntBASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Gm8344-201ENSMUST00000119813 856 ntBASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Alms1Q8K4E0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms