Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.99■□□□□ 0.15
CopaQ8CIE6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CopaQ8CIE6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CopaQ8CIE6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.99■□□□□ 0.15
CopaQ8CIE6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.99■□□□□ 0.15
CopaQ8CIE6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.99■□□□□ 0.15
CopaQ8CIE6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.99■□□□□ 0.15
CopaQ8CIE6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.99■□□□□ 0.15
CopaQ8CIE6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.99■□□□□ 0.15
CopaQ8CIE6 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.99■□□□□ 0.15
CopaQ8CIE6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CopaQ8CIE6 Rps4l-201ENSMUST00000071745 943 ntBASIC15.99■□□□□ 0.15
CopaQ8CIE6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
CopaQ8CIE6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CopaQ8CIE6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CopaQ8CIE6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.99■□□□□ 0.15
CopaQ8CIE6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CopaQ8CIE6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CopaQ8CIE6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CopaQ8CIE6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CopaQ8CIE6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CopaQ8CIE6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.99■□□□□ 0.15
CopaQ8CIE6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.98■□□□□ 0.15
CopaQ8CIE6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CopaQ8CIE6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.98■□□□□ 0.15
CopaQ8CIE6 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CopaQ8CIE6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CopaQ8CIE6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CopaQ8CIE6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CopaQ8CIE6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.97■□□□□ 0.15
CopaQ8CIE6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.97■□□□□ 0.15
CopaQ8CIE6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Gm6443-201ENSMUST00000203599 874 ntBASIC15.97■□□□□ 0.15
CopaQ8CIE6 Gm6296-201ENSMUST00000222599 943 ntBASIC15.97■□□□□ 0.15
CopaQ8CIE6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CopaQ8CIE6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CopaQ8CIE6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CopaQ8CIE6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CopaQ8CIE6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CopaQ8CIE6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CopaQ8CIE6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CopaQ8CIE6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CopaQ8CIE6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CopaQ8CIE6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
CopaQ8CIE6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CopaQ8CIE6 Gm44357-201ENSMUST00000195897 142 ntBASIC15.96■□□□□ 0.15
CopaQ8CIE6 Gm19658-201ENSMUST00000196231 138 ntBASIC15.96■□□□□ 0.15
CopaQ8CIE6 Gm44367-201ENSMUST00000196836 138 ntBASIC15.96■□□□□ 0.15
CopaQ8CIE6 Gm44350-201ENSMUST00000197197 138 ntBASIC15.96■□□□□ 0.15
CopaQ8CIE6 Gm44390-201ENSMUST00000197533 144 ntBASIC15.96■□□□□ 0.15
CopaQ8CIE6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CopaQ8CIE6 Gm44313-201ENSMUST00000198018 138 ntBASIC15.96■□□□□ 0.15
CopaQ8CIE6 Gm44486-201ENSMUST00000198508 138 ntBASIC15.96■□□□□ 0.15
CopaQ8CIE6 Gm44314-201ENSMUST00000199263 138 ntBASIC15.96■□□□□ 0.15
CopaQ8CIE6 Gm44394-201ENSMUST00000199558 138 ntBASIC15.96■□□□□ 0.15
CopaQ8CIE6 Gm44484-201ENSMUST00000199873 138 ntBASIC15.96■□□□□ 0.15
CopaQ8CIE6 Gm44466-201ENSMUST00000200264 138 ntBASIC15.96■□□□□ 0.15
CopaQ8CIE6 Gm44359-201ENSMUST00000200671 138 ntBASIC15.96■□□□□ 0.15
CopaQ8CIE6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CopaQ8CIE6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CopaQ8CIE6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
CopaQ8CIE6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms