Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Syt7-205ENSMUST00000224135 1557 ntBASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Gm16026-204ENSMUST00000162652 683 ntBASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Gm22189-201ENSMUST00000103822 86 ntBASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Gm15483-201ENSMUST00000120338 456 ntBASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rp1l1Q8CGM2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Gm25857-201ENSMUST00000082788 129 ntBASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rp1l1Q8CGM2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 Gm12138-201ENSMUST00000122180 951 ntBASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 Gm44344-201ENSMUST00000200287 129 ntBASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rp1l1Q8CGM2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rp1l1Q8CGM2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rp1l1Q8CGM2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rp1l1Q8CGM2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.08■□□□□ 0.17
Rp1l1Q8CGM2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rp1l1Q8CGM2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rp1l1Q8CGM2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.08■□□□□ 0.17
Rp1l1Q8CGM2 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rp1l1Q8CGM2 Gm6218-201ENSMUST00000219812 628 ntBASIC16.08■□□□□ 0.17
Rp1l1Q8CGM2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Rp1l1Q8CGM2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Gm38225-201ENSMUST00000194001 393 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms